Categories
Latest Posts
Running Cromwell on AWS/Batch
- Posted: 2018-11-21.
Parallel mysql myisam repair
- Posted: 2018-11-21.
Does a TKI like Crizotinib kill tumor cells ?
- Posted: 2018-10-28.
Save Spotify to flac or mp3
- Posted: 2018-07-14.
Replace all symlinks by the original file
- Posted: 2018-03-02.
Tag Collection
VMplayer cromwell AWS galaxy Conky Literature line-end FTP cotd Ubuntu windows ExecOnCommand docker Rcran torque/pbs NSCLC Paired-End fuzzy match sudoers timer NFS Typesetting TrainOfThought NGS osd_cat todo.txt Headless spotify Remote api R Cluster fancy SLURM tikz javascript Yelo.tv dos2unix Perl indent Silverlight terraform HPC Linespacing cloudformation drmaa bibtex levenshtein proftpd GATK natbib LaTeX XFS apoptosis telenet VMware python Installation antialias mpd Image BASH spam Apache preamble bioinformatics PHP CPAN Recovery Password compress whitespace Searching Batch mysql
Log in
All Entries On bioinformatics
A total of 3 entries were found. Click on the titles to read the posts.
- Compress all fastq/vcf files in a storage tree with a single command (2013-03-06 - Geert Vandeweyer)
this was my command of the day:
- Creating GATK VQSR plots (2013-05-15 - Geert Vandeweyer)
GATK provides nice plots on the gaussian distributions used by the variant quality recalibration tool.
However, coverting the R-scripts to the actual pdf plots proved n...
- Running Cromwell on AWS/Batch (2018-11-21 - Geert Vandeweyer)
Cromwell is one of the widely used workflow managers used in bioinformatics to run NGS analysis pipelines. Based on the WDL workflow language, it supports runnings tasks as regular scripts or as co...
- Creating GATK VQSR plots (2013-05-15 - Geert Vandeweyer)